Stanford’s Ph.D. in Biology supports pioneering research into molecular mechanisms, evolutionary patterns, ecological interactions, and synthetic biology. These dissertation ideas equip researchers to decode life systems and address health, environment, and biodiversity challenges.
Single-Cell RNA Sequencing to Uncover Cell Fate Decisions
Gene Regulatory Networks in Embryonic Pattern Formation
CRISPR-Based Functional Genomics in Developmental Systems
Neural Circuit Mapping Using Optogenetics in Model Organisms
Adaptive Evolution of Regulatory Elements in Vertebrates
Mechanisms of Resistance in Cancer Cell Populations
Microbial Interactions in Plant Root Microbiomes
Cellular Senescence Pathways in Aging and Disease
Molecular Basis of Host-Pathogen Co-Evolution
Comparative Transcriptomics in Extremophile Species
Real-Time Calcium Imaging in Live Neuronal Networks
Synthetic Gene Circuits for Biosensing Applications
RNA Modifications and Their Role in Gene Expression
Chromatin Remodeling Dynamics During Cell Differentiation
Horizontal Gene Transfer in Environmental Microbiomes
Epigenetic Inheritance Across Generations in Model Organisms
Neuroplasticity Mechanisms in Behavioral Adaptation
Integrative Multi-Omics for Metabolic Network Reconstruction
In Vivo Protein-Protein Interaction Mapping Using BioID
Computational Modeling of Morphogen Gradients in Development
From gene expression analysis to ecological modeling and lab automation workflows, Collexa helps Stanford Biology Ph.D. students bring ideas to publication and impact.
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